Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh4P39038 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.85□□□□□ -0.19
Cdh4P39038 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh4P39038 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh4P39038 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh4P39038 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh4P39038 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh4P39038 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh4P39038 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh4P39038 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdh4P39038 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cdh4P39038 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.84□□□□□ -0.19
Cdh4P39038 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Cdh4P39038 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Cdh4P39038 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.84□□□□□ -0.19
Cdh4P39038 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.84□□□□□ -0.19
Cdh4P39038 Gm10253-201ENSMUST00000194270 940 ntBASIC13.84□□□□□ -0.19
Cdh4P39038 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.84□□□□□ -0.19
Cdh4P39038 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdh4P39038 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.84□□□□□ -0.19
Cdh4P39038 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cdh4P39038 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cdh4P39038 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cdh4P39038 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cdh4P39038 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cdh4P39038 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdh4P39038 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Cdh4P39038 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.19
Cdh4P39038 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdh4P39038 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh4P39038 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.83□□□□□ -0.2
Cdh4P39038 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.83□□□□□ -0.2
Cdh4P39038 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh4P39038 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh4P39038 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh4P39038 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.83□□□□□ -0.2
Cdh4P39038 Gm7774-201ENSMUST00000200064 533 ntBASIC13.83□□□□□ -0.2
Cdh4P39038 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh4P39038 Gm18049-201ENSMUST00000208909 581 ntBASIC13.83□□□□□ -0.2
Cdh4P39038 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.83□□□□□ -0.2
Cdh4P39038 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.83□□□□□ -0.2
Cdh4P39038 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cdh4P39038 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cdh4P39038 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.83□□□□□ -0.2
Cdh4P39038 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh4P39038 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cdh4P39038 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh4P39038 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh4P39038 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.83□□□□□ -0.2
Cdh4P39038 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh4P39038 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh4P39038 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh4P39038 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh4P39038 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh4P39038 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh4P39038 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh4P39038 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh4P39038 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Cdh4P39038 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh4P39038 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.83□□□□□ -0.2
Cdh4P39038 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh4P39038 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh4P39038 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cdh4P39038 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Cdh4P39038 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh4P39038 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms