Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HmgclP38060 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HmgclP38060 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HmgclP38060 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HmgclP38060 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HmgclP38060 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HmgclP38060 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HmgclP38060 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HmgclP38060 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HmgclP38060 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HmgclP38060 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HmgclP38060 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
HmgclP38060 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HmgclP38060 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HmgclP38060 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HmgclP38060 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.24□□□□□ -0.13
HmgclP38060 Gm6736-201ENSMUST00000166583 948 ntBASIC14.24□□□□□ -0.13
HmgclP38060 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.24□□□□□ -0.13
HmgclP38060 Gm27702-201ENSMUST00000184512 56 ntBASIC14.24□□□□□ -0.13
HmgclP38060 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.24□□□□□ -0.13
HmgclP38060 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HmgclP38060 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HmgclP38060 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HmgclP38060 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HmgclP38060 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HmgclP38060 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.24□□□□□ -0.13
HmgclP38060 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HmgclP38060 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HmgclP38060 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HmgclP38060 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HmgclP38060 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
HmgclP38060 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HmgclP38060 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HmgclP38060 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HmgclP38060 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Gm43474-201ENSMUST00000196415 774 ntBASIC14.23□□□□□ -0.13
HmgclP38060 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.23□□□□□ -0.13
HmgclP38060 Gm18049-201ENSMUST00000208909 581 ntBASIC14.23□□□□□ -0.13
HmgclP38060 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
HmgclP38060 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.23□□□□□ -0.13
HmgclP38060 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
HmgclP38060 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HmgclP38060 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HmgclP38060 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HmgclP38060 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HmgclP38060 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HmgclP38060 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HmgclP38060 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HmgclP38060 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HmgclP38060 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HmgclP38060 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HmgclP38060 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HmgclP38060 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
HmgclP38060 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HmgclP38060 Gm13015-201ENSMUST00000118674 204 ntBASIC14.22□□□□□ -0.13
HmgclP38060 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HmgclP38060 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HmgclP38060 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HmgclP38060 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms