Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.2□□□□□ -0.14
Hoxa4P06798 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa4P06798 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa4P06798 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.2□□□□□ -0.14
Hoxa4P06798 Gm13223-201ENSMUST00000118609 747 ntBASIC14.2□□□□□ -0.14
Hoxa4P06798 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa4P06798 Gm27321-201ENSMUST00000185021 205 ntBASIC14.2□□□□□ -0.14
Hoxa4P06798 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.2□□□□□ -0.14
Hoxa4P06798 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa4P06798 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa4P06798 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa4P06798 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa4P06798 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa4P06798 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa4P06798 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa4P06798 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa4P06798 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa4P06798 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.2□□□□□ -0.14
Hoxa4P06798 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hoxa4P06798 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa4P06798 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hoxa4P06798 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Hoxa4P06798 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.19□□□□□ -0.14
Hoxa4P06798 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa4P06798 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Hoxa4P06798 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa4P06798 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hoxa4P06798 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa4P06798 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa4P06798 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa4P06798 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.19□□□□□ -0.14
Hoxa4P06798 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa4P06798 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa4P06798 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.19□□□□□ -0.14
Hoxa4P06798 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.19□□□□□ -0.14
Hoxa4P06798 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa4P06798 Gm6888-201ENSMUST00000221983 706 ntBASIC14.19□□□□□ -0.14
Hoxa4P06798 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa4P06798 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa4P06798 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.19□□□□□ -0.14
Hoxa4P06798 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa4P06798 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa4P06798 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa4P06798 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa4P06798 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.19□□□□□ -0.14
Hoxa4P06798 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa4P06798 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.18□□□□□ -0.14
Hoxa4P06798 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hoxa4P06798 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.18□□□□□ -0.14
Hoxa4P06798 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.18□□□□□ -0.14
Hoxa4P06798 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.18□□□□□ -0.14
Hoxa4P06798 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hoxa4P06798 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hoxa4P06798 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Hoxa4P06798 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Hoxa4P06798 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.18□□□□□ -0.14
Hoxa4P06798 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Hoxa4P06798 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa4P06798 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.17□□□□□ -0.14
Hoxa4P06798 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hoxa4P06798 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hoxa4P06798 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hoxa4P06798 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hoxa4P06798 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.17□□□□□ -0.14
Hoxa4P06798 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hoxa4P06798 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms