Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3cP02301 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3cP02301 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.42□□□□□ -0.42
H3f3cP02301 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3cP02301 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.42□□□□□ -0.42
H3f3cP02301 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.42□□□□□ -0.42
H3f3cP02301 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3cP02301 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.42□□□□□ -0.42
H3f3cP02301 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.42□□□□□ -0.42
H3f3cP02301 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3cP02301 Gm18737-201ENSMUST00000173594 937 ntBASIC12.42□□□□□ -0.42
H3f3cP02301 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3cP02301 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3cP02301 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3cP02301 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3cP02301 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
H3f3cP02301 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3cP02301 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3cP02301 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3cP02301 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.42□□□□□ -0.42
H3f3cP02301 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
H3f3cP02301 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3cP02301 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3cP02301 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3cP02301 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3cP02301 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3cP02301 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3cP02301 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3cP02301 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3cP02301 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3cP02301 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3cP02301 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3cP02301 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3cP02301 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3cP02301 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
H3f3cP02301 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
H3f3cP02301 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.41□□□□□ -0.42
H3f3cP02301 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.41□□□□□ -0.42
H3f3cP02301 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3cP02301 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3cP02301 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3cP02301 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
H3f3cP02301 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
H3f3cP02301 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3cP02301 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3cP02301 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.41□□□□□ -0.42
H3f3cP02301 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.41□□□□□ -0.42
H3f3cP02301 Gm15483-201ENSMUST00000120338 456 ntBASIC12.41□□□□□ -0.42
H3f3cP02301 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.41□□□□□ -0.42
H3f3cP02301 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.41□□□□□ -0.42
H3f3cP02301 Rprl2-201ENSMUST00000157150 290 ntBASIC12.41□□□□□ -0.42
H3f3cP02301 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3cP02301 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.41□□□□□ -0.42
H3f3cP02301 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3cP02301 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.41□□□□□ -0.42
H3f3cP02301 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.41□□□□□ -0.42
H3f3cP02301 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
H3f3cP02301 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3cP02301 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
H3f3cP02301 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3cP02301 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3cP02301 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.41□□□□□ -0.42
H3f3cP02301 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.41□□□□□ -0.42
H3f3cP02301 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3cP02301 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.41□□□□□ -0.42
H3f3cP02301 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3cP02301 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
H3f3cP02301 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
H3f3cP02301 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3cP02301 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.41□□□□□ -0.42
H3f3cP02301 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3cP02301 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3cP02301 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3cP02301 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3cP02301 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3cP02301 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.4□□□□□ -0.42
H3f3cP02301 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3cP02301 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3cP02301 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3cP02301 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3cP02301 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3cP02301 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3cP02301 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3cP02301 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3cP02301 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3cP02301 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.4□□□□□ -0.42
H3f3cP02301 Gm11543-201ENSMUST00000120758 370 ntBASIC12.4□□□□□ -0.42
H3f3cP02301 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.4□□□□□ -0.42
H3f3cP02301 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3cP02301 Gm9726-201ENSMUST00000180321 678 ntBASIC12.4□□□□□ -0.42
H3f3cP02301 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.4□□□□□ -0.42
H3f3cP02301 Gm2451-201ENSMUST00000199447 999 ntBASIC12.4□□□□□ -0.42
H3f3cP02301 Gm10290-201ENSMUST00000200451 999 ntBASIC12.4□□□□□ -0.42
H3f3cP02301 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3cP02301 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.4□□□□□ -0.42
H3f3cP02301 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.4□□□□□ -0.42
H3f3cP02301 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
H3f3cP02301 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
H3f3cP02301 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3cP02301 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms