Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC10.57□□□□□ -0.72
TcraP01849 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
TcraP01849 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
TcraP01849 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Gm4609-201ENSMUST00000106443 1002 ntBASIC10.56□□□□□ -0.72
TcraP01849 Gm5138-201ENSMUST00000113842 1002 ntBASIC10.56□□□□□ -0.72
TcraP01849 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Gm15191-201ENSMUST00000117933 1000 ntBASIC10.56□□□□□ -0.72
TcraP01849 Gm12182-201ENSMUST00000118655 1008 ntBASIC10.56□□□□□ -0.72
TcraP01849 Gm13882-201ENSMUST00000120886 1002 ntBASIC10.56□□□□□ -0.72
TcraP01849 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC10.56□□□□□ -0.72
TcraP01849 Gm10284-201ENSMUST00000145057 1005 ntBASIC10.56□□□□□ -0.72
TcraP01849 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC10.56□□□□□ -0.72
TcraP01849 Gm10481-201ENSMUST00000179228 1002 ntBASIC10.56□□□□□ -0.72
TcraP01849 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC10.56□□□□□ -0.72
TcraP01849 Gm2574-201ENSMUST00000181051 1002 ntBASIC10.56□□□□□ -0.72
TcraP01849 Gm3200-201ENSMUST00000181493 1002 ntBASIC10.56□□□□□ -0.72
TcraP01849 Gm8825-201ENSMUST00000182565 998 ntBASIC10.56□□□□□ -0.72
TcraP01849 Gm4518-201ENSMUST00000182638 718 ntBASIC10.56□□□□□ -0.72
TcraP01849 Gm7286-201ENSMUST00000182691 1007 ntBASIC10.56□□□□□ -0.72
TcraP01849 Gm8330-201ENSMUST00000182754 1008 ntBASIC10.56□□□□□ -0.72
TcraP01849 Gm4575-201ENSMUST00000182991 1002 ntBASIC10.56□□□□□ -0.72
TcraP01849 Gm7507-201ENSMUST00000183053 1008 ntBASIC10.56□□□□□ -0.72
TcraP01849 Gm8709-201ENSMUST00000183230 1012 ntBASIC10.56□□□□□ -0.72
TcraP01849 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC10.56□□□□□ -0.72
TcraP01849 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC10.56□□□□□ -0.72
TcraP01849 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Gm10293-201ENSMUST00000076317 1002 ntBASIC10.56□□□□□ -0.72
TcraP01849 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Gm6316-201ENSMUST00000082064 1020 ntBASIC10.56□□□□□ -0.72
TcraP01849 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.56□□□□□ -0.72
TcraP01849 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
TcraP01849 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
TcraP01849 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TcraP01849 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
TcraP01849 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
TcraP01849 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
TcraP01849 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
TcraP01849 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC10.55□□□□□ -0.72
TcraP01849 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
TcraP01849 Ssr1-204ENSMUST00000225319 1610 ntBASIC10.55□□□□□ -0.72
TcraP01849 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
TcraP01849 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.55□□□□□ -0.72
TcraP01849 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms