Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna4O70174 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna4O70174 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna4O70174 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna4O70174 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna4O70174 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna4O70174 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna4O70174 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.6□□□□□ -0.07
Chrna4O70174 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.6□□□□□ -0.07
Chrna4O70174 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.6□□□□□ -0.07
Chrna4O70174 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.6□□□□□ -0.07
Chrna4O70174 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Chrna4O70174 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna4O70174 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna4O70174 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna4O70174 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna4O70174 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna4O70174 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna4O70174 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna4O70174 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna4O70174 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Chrna4O70174 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna4O70174 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Chrna4O70174 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chrna4O70174 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Chrna4O70174 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chrna4O70174 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.59□□□□□ -0.07
Chrna4O70174 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chrna4O70174 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Chrna4O70174 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chrna4O70174 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chrna4O70174 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Chrna4O70174 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Chrna4O70174 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chrna4O70174 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.59□□□□□ -0.07
Chrna4O70174 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chrna4O70174 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.59□□□□□ -0.07
Chrna4O70174 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Chrna4O70174 Gm2213-201ENSMUST00000197485 688 ntBASIC14.59□□□□□ -0.07
Chrna4O70174 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Chrna4O70174 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chrna4O70174 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Chrna4O70174 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chrna4O70174 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.59□□□□□ -0.07
Chrna4O70174 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chrna4O70174 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chrna4O70174 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chrna4O70174 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chrna4O70174 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chrna4O70174 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chrna4O70174 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Chrna4O70174 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chrna4O70174 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chrna4O70174 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chrna4O70174 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Chrna4O70174 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chrna4O70174 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Chrna4O70174 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Chrna4O70174 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chrna4O70174 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Chrna4O70174 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chrna4O70174 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chrna4O70174 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chrna4O70174 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chrna4O70174 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chrna4O70174 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chrna4O70174 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Chrna4O70174 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chrna4O70174 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Chrna4O70174 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chrna4O70174 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chrna4O70174 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chrna4O70174 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Chrna4O70174 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.58□□□□□ -0.08
Chrna4O70174 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Chrna4O70174 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chrna4O70174 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chrna4O70174 Gm44335-201ENSMUST00000196879 141 ntBASIC14.58□□□□□ -0.08
Chrna4O70174 Gm44297-201ENSMUST00000198304 141 ntBASIC14.58□□□□□ -0.08
Chrna4O70174 Gm44346-201ENSMUST00000198851 141 ntBASIC14.58□□□□□ -0.08
Chrna4O70174 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chrna4O70174 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chrna4O70174 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chrna4O70174 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.58□□□□□ -0.08
Chrna4O70174 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chrna4O70174 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chrna4O70174 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Chrna4O70174 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chrna4O70174 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chrna4O70174 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chrna4O70174 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.58□□□□□ -0.08
Chrna4O70174 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chrna4O70174 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chrna4O70174 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chrna4O70174 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.57□□□□□ -0.08
Chrna4O70174 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.57□□□□□ -0.08
Chrna4O70174 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chrna4O70174 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chrna4O70174 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chrna4O70174 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms