Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.4□□□□□ -0.58
Pde6dO55057 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pde6dO55057 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pde6dO55057 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pde6dO55057 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pde6dO55057 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pde6dO55057 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pde6dO55057 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pde6dO55057 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pde6dO55057 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.58
Pde6dO55057 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pde6dO55057 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pde6dO55057 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pde6dO55057 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pde6dO55057 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pde6dO55057 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.39□□□□□ -0.59
Pde6dO55057 Grk6-207ENSMUST00000225925 2769 ntBASIC11.39□□□□□ -0.59
Pde6dO55057 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.39□□□□□ -0.59
Pde6dO55057 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.39□□□□□ -0.59
Pde6dO55057 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.39□□□□□ -0.59
Pde6dO55057 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pde6dO55057 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pde6dO55057 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Gm15358-201ENSMUST00000119249 520 ntBASIC11.39□□□□□ -0.59
Pde6dO55057 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Gm10499-201ENSMUST00000174094 934 ntBASIC11.39□□□□□ -0.59
Pde6dO55057 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC11.39□□□□□ -0.59
Pde6dO55057 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.39□□□□□ -0.59
Pde6dO55057 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pde6dO55057 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Pde6dO55057 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.39□□□□□ -0.59
Pde6dO55057 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.39□□□□□ -0.59
Pde6dO55057 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pde6dO55057 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Pde6dO55057 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Pde6dO55057 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pde6dO55057 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Pde6dO55057 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.38□□□□□ -0.59
Pde6dO55057 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Pde6dO55057 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.38□□□□□ -0.59
Pde6dO55057 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pde6dO55057 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Pde6dO55057 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.38□□□□□ -0.59
Pde6dO55057 Rprl3-201ENSMUST00000157400 290 ntBASIC11.38□□□□□ -0.59
Pde6dO55057 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Pde6dO55057 AC164629.5-201ENSMUST00000220387 632 ntBASIC11.38□□□□□ -0.59
Pde6dO55057 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Pde6dO55057 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pde6dO55057 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.38□□□□□ -0.59
Pde6dO55057 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms