Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm11127A7VMS2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gm11127A7VMS2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm11127A7VMS2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm11127A7VMS2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Gm11127A7VMS2 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gm11127A7VMS2 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.84□□□□□ -0.35
Gm11127A7VMS2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm11127A7VMS2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm11127A7VMS2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm11127A7VMS2 Gm13418-201ENSMUST00000119097 944 ntBASIC12.84□□□□□ -0.35
Gm11127A7VMS2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Gm11127A7VMS2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.84□□□□□ -0.35
Gm11127A7VMS2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.84□□□□□ -0.35
Gm11127A7VMS2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Gm11127A7VMS2 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gm11127A7VMS2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gm11127A7VMS2 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.84□□□□□ -0.35
Gm11127A7VMS2 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm11127A7VMS2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm11127A7VMS2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm11127A7VMS2 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm11127A7VMS2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm11127A7VMS2 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.83□□□□□ -0.35
Gm11127A7VMS2 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.83□□□□□ -0.35
Gm11127A7VMS2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gm11127A7VMS2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gm11127A7VMS2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gm11127A7VMS2 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Gm44357-201ENSMUST00000195897 142 ntBASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Gm19658-201ENSMUST00000196231 138 ntBASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Gm44367-201ENSMUST00000196836 138 ntBASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Gm44350-201ENSMUST00000197197 138 ntBASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Gm44390-201ENSMUST00000197533 144 ntBASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Gm44313-201ENSMUST00000198018 138 ntBASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Gm44486-201ENSMUST00000198508 138 ntBASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Gm44314-201ENSMUST00000199263 138 ntBASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Gm44394-201ENSMUST00000199558 138 ntBASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Gm44484-201ENSMUST00000199873 138 ntBASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Gm44466-201ENSMUST00000200264 138 ntBASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Gm44359-201ENSMUST00000200671 138 ntBASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.83□□□□□ -0.36
Gm11127A7VMS2 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm11127A7VMS2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm11127A7VMS2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm11127A7VMS2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Gm11127A7VMS2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm11127A7VMS2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm11127A7VMS2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm11127A7VMS2 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.82□□□□□ -0.36
Gm11127A7VMS2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm11127A7VMS2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm11127A7VMS2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Gm11127A7VMS2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm11127A7VMS2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.82□□□□□ -0.36
Gm11127A7VMS2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.82□□□□□ -0.36
Gm11127A7VMS2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm11127A7VMS2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Gm11127A7VMS2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm11127A7VMS2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.82□□□□□ -0.36
Gm11127A7VMS2 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm11127A7VMS2 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.82□□□□□ -0.36
Gm11127A7VMS2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm11127A7VMS2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.82□□□□□ -0.36
Gm11127A7VMS2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm11127A7VMS2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm11127A7VMS2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.82□□□□□ -0.36
Gm11127A7VMS2 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.82□□□□□ -0.36
Gm11127A7VMS2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms