Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-1A0N8R1 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Gm10154-201ENSMUST00000084445 354 ntBASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-1A0N8R1 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms