Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Gm25287-201ENSMUST00000103846 110 ntBASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Gm22918-201ENSMUST00000103855 110 ntBASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Mir449b-201ENSMUST00000104833 80 ntBASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Gm15483-201ENSMUST00000120338 456 ntBASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Gm43767-201ENSMUST00000198933 381 ntBASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Phf1Q9Z1B8 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Phf1Q9Z1B8 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Phf1Q9Z1B8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Phf1Q9Z1B8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
Phf1Q9Z1B8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.33□□□□□ -0.28
Phf1Q9Z1B8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Phf1Q9Z1B8 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Phf1Q9Z1B8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Phf1Q9Z1B8 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Phf1Q9Z1B8 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Phf1Q9Z1B8 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Phf1Q9Z1B8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Phf1Q9Z1B8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.33□□□□□ -0.28
Phf1Q9Z1B8 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.33□□□□□ -0.28
Phf1Q9Z1B8 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.33□□□□□ -0.28
Phf1Q9Z1B8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.33□□□□□ -0.28
Phf1Q9Z1B8 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.33□□□□□ -0.28
Phf1Q9Z1B8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.33□□□□□ -0.28
Phf1Q9Z1B8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Phf1Q9Z1B8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Phf1Q9Z1B8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Phf1Q9Z1B8 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Phf1Q9Z1B8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Phf1Q9Z1B8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Phf1Q9Z1B8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Phf1Q9Z1B8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms