Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Atp6ap1Q9R1Q9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atp6ap1Q9R1Q9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atp6ap1Q9R1Q9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atp6ap1Q9R1Q9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.18□□□□□ -0.14
Atp6ap1Q9R1Q9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Atp6ap1Q9R1Q9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Gm14042-201ENSMUST00000120139 833 ntBASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atp6ap1Q9R1Q9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Atp6ap1Q9R1Q9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp6ap1Q9R1Q9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atp6ap1Q9R1Q9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp6ap1Q9R1Q9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atp6ap1Q9R1Q9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp6ap1Q9R1Q9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp6ap1Q9R1Q9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp6ap1Q9R1Q9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp6ap1Q9R1Q9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atp6ap1Q9R1Q9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Atp6ap1Q9R1Q9 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp6ap1Q9R1Q9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atp6ap1Q9R1Q9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.15□□□□□ -0.14
Atp6ap1Q9R1Q9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.15□□□□□ -0.14
Atp6ap1Q9R1Q9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms