Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Gm5177-201ENSMUST00000183092 997 ntBASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sec61a2Q9JLR1 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Gm44492-201ENSMUST00000197012 141 ntBASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Gm45747-201ENSMUST00000212203 999 ntBASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sec61a2Q9JLR1 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.04□□□□□ -0.32
Sec61a2Q9JLR1 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms