Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Upk1aQ9D132 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk1aQ9D132 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk1aQ9D132 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Upk1aQ9D132 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk1aQ9D132 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.72□□□□□ -0.21
Upk1aQ9D132 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.72□□□□□ -0.21
Upk1aQ9D132 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk1aQ9D132 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk1aQ9D132 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk1aQ9D132 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Upk1aQ9D132 Gm7222-201ENSMUST00000117512 906 ntBASIC13.72□□□□□ -0.21
Upk1aQ9D132 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.72□□□□□ -0.21
Upk1aQ9D132 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk1aQ9D132 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Upk1aQ9D132 Gm6376-201ENSMUST00000209407 580 ntBASIC13.72□□□□□ -0.21
Upk1aQ9D132 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.72□□□□□ -0.21
Upk1aQ9D132 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk1aQ9D132 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Upk1aQ9D132 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.72□□□□□ -0.21
Upk1aQ9D132 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk1aQ9D132 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Upk1aQ9D132 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
Upk1aQ9D132 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.72□□□□□ -0.21
Upk1aQ9D132 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk1aQ9D132 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk1aQ9D132 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk1aQ9D132 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.72□□□□□ -0.21
Upk1aQ9D132 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Upk1aQ9D132 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.72□□□□□ -0.21
Upk1aQ9D132 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.71□□□□□ -0.21
Upk1aQ9D132 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Gm24589-201ENSMUST00000116692 94 ntBASIC13.71□□□□□ -0.21
Upk1aQ9D132 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Upk1aQ9D132 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Upk1aQ9D132 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Upk1aQ9D132 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Upk1aQ9D132 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Upk1aQ9D132 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Upk1aQ9D132 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.71□□□□□ -0.22
Upk1aQ9D132 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Upk1aQ9D132 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Upk1aQ9D132 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Upk1aQ9D132 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Upk1aQ9D132 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.7□□□□□ -0.22
Upk1aQ9D132 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Gm11764-201ENSMUST00000120221 623 ntBASIC13.7□□□□□ -0.22
Upk1aQ9D132 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Gm8584-201ENSMUST00000171982 758 ntBASIC13.7□□□□□ -0.22
Upk1aQ9D132 Gm7230-201ENSMUST00000173026 815 ntBASIC13.7□□□□□ -0.22
Upk1aQ9D132 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Rps4l-201ENSMUST00000071745 943 ntBASIC13.7□□□□□ -0.22
Upk1aQ9D132 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Upk1aQ9D132 Acot6-202ENSMUST00000222921 3622 ntBASIC13.7□□□□□ -0.22
Upk1aQ9D132 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms