Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 Gm8749-201ENSMUST00000117737 331 ntBASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 Gm9083-201ENSMUST00000120423 819 ntBASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 Gm8194-201ENSMUST00000159783 859 ntBASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 Gm5051-201ENSMUST00000204085 485 ntBASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lysmd1Q9D0E3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.27■□□□□ 0.04
Lysmd1Q9D0E3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lysmd1Q9D0E3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Lysmd1Q9D0E3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lysmd1Q9D0E3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lysmd1Q9D0E3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lysmd1Q9D0E3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lysmd1Q9D0E3 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lysmd1Q9D0E3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lysmd1Q9D0E3 Gm12012-201ENSMUST00000118857 1066 ntBASIC15.27■□□□□ 0.04
Lysmd1Q9D0E3 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Lysmd1Q9D0E3 Gm18893-201ENSMUST00000198416 943 ntBASIC15.27■□□□□ 0.04
Lysmd1Q9D0E3 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lysmd1Q9D0E3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lysmd1Q9D0E3 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lysmd1Q9D0E3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC15.27■□□□□ 0.04
Lysmd1Q9D0E3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lysmd1Q9D0E3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.27■□□□□ 0.03
Lysmd1Q9D0E3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lysmd1Q9D0E3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.27■□□□□ 0.03
Lysmd1Q9D0E3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lysmd1Q9D0E3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lysmd1Q9D0E3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lysmd1Q9D0E3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Gm13369-201ENSMUST00000119442 987 ntBASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Gm12208-201ENSMUST00000122004 163 ntBASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Mospd4-201ENSMUST00000180618 576 ntBASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Gm9678-201ENSMUST00000198979 1149 ntBASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.26■□□□□ 0.03
Lysmd1Q9D0E3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Gm13216-201ENSMUST00000117145 591 ntBASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Mir6958-201ENSMUST00000184207 73 ntBASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 CT025551.1-201ENSMUST00000223996 692 ntBASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd1Q9D0E3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms