Protein–RNA interactions for Protein: Q9CWN7

Cnot11, CCR4-NOT transcription complex subunit 11, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot11Q9CWN7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Gm8000-201ENSMUST00000188378 592 ntBASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot11Q9CWN7 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Mir3113-201ENSMUST00000175478 76 ntBASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Gm5177-201ENSMUST00000183092 997 ntBASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Gm27301-201ENSMUST00000184012 127 ntBASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Gm27525-201ENSMUST00000184465 107 ntBASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot11Q9CWN7 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Gm17271-201ENSMUST00000165535 355 ntBASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Gm10154-201ENSMUST00000084445 354 ntBASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot11Q9CWN7 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms