Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
H2afb1Q9CQ70 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb1Q9CQ70 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb1Q9CQ70 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb1Q9CQ70 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb1Q9CQ70 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb1Q9CQ70 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.87□□□□□ -0.51
H2afb1Q9CQ70 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb1Q9CQ70 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb1Q9CQ70 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb1Q9CQ70 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb1Q9CQ70 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb1Q9CQ70 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
H2afb1Q9CQ70 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Gm14140-201ENSMUST00000119999 995 ntBASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Gm27301-201ENSMUST00000184012 127 ntBASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afb1Q9CQ70 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Gm45098-201ENSMUST00000207179 657 ntBASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb1Q9CQ70 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb1Q9CQ70 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms