Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Gm13597-201ENSMUST00000121239 375 ntBASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Chmp1b1Q99LU0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.71□□□□□ -0.22
Chmp1b1Q99LU0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp1b1Q99LU0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp1b1Q99LU0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp1b1Q99LU0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.71□□□□□ -0.22
Chmp1b1Q99LU0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp1b1Q99LU0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp1b1Q99LU0 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp1b1Q99LU0 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp1b1Q99LU0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Chmp1b1Q99LU0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Chmp1b1Q99LU0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp1b1Q99LU0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp1b1Q99LU0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp1b1Q99LU0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.71□□□□□ -0.22
Chmp1b1Q99LU0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp1b1Q99LU0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp1b1Q99LU0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Gm10154-201ENSMUST00000084445 354 ntBASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1b1Q99LU0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Gm11594-201ENSMUST00000122313 162 ntBASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1b1Q99LU0 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms