Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sf3b3Q921M3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Sf3b3Q921M3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sf3b3Q921M3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sf3b3Q921M3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sf3b3Q921M3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Sf3b3Q921M3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sf3b3Q921M3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.31■□□□□ 0.36
Sf3b3Q921M3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sf3b3Q921M3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sf3b3Q921M3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sf3b3Q921M3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sf3b3Q921M3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sf3b3Q921M3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
Sf3b3Q921M3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3b3Q921M3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.3■□□□□ 0.36
Sf3b3Q921M3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Gm18307-201ENSMUST00000206864 949 ntBASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Gm18062-201ENSMUST00000208020 547 ntBASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Gm18055-201ENSMUST00000208254 547 ntBASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sf3b3Q921M3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sf3b3Q921M3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Sf3b3Q921M3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3b3Q921M3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3b3Q921M3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3b3Q921M3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3b3Q921M3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3b3Q921M3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3b3Q921M3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3b3Q921M3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC17.28■□□□□ 0.36
Sf3b3Q921M3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3b3Q921M3 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.28■□□□□ 0.36
Sf3b3Q921M3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3b3Q921M3 Gm7446-201ENSMUST00000221035 1240 ntBASIC17.28■□□□□ 0.36
Sf3b3Q921M3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3b3Q921M3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3b3Q921M3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3b3Q921M3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3b3Q921M3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3b3Q921M3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3b3Q921M3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3b3Q921M3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3b3Q921M3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sf3b3Q921M3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Sf3b3Q921M3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3b3Q921M3 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.27■□□□□ 0.36
Sf3b3Q921M3 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3b3Q921M3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Sf3b3Q921M3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3b3Q921M3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3b3Q921M3 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3b3Q921M3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3b3Q921M3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.27■□□□□ 0.36
Sf3b3Q921M3 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.27■□□□□ 0.36
Sf3b3Q921M3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sf3b3Q921M3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms