Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Gm18889-201ENSMUST00000174284 929 ntBASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Gm27920-201ENSMUST00000183953 96 ntBASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Olfr286-202ENSMUST00000205305 969 ntBASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb17Q91VD8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Mir1192-201ENSMUST00000116976 121 ntBASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Gm11543-201ENSMUST00000120758 370 ntBASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Gm9726-201ENSMUST00000180321 678 ntBASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Gm38384-201ENSMUST00000195413 1122 ntBASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 CT025526.1-201ENSMUST00000217327 267 ntBASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb17Q91VD8 Gm37437-201ENSMUST00000194451 1937 ntBASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Gm2810-201ENSMUST00000118681 990 ntBASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Gm11510-201ENSMUST00000120278 347 ntBASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Gm5479-201ENSMUST00000160578 435 ntBASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Gm21139-201ENSMUST00000186594 877 ntBASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 AC173482.2-201ENSMUST00000224044 750 ntBASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb17Q91VD8 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb17Q91VD8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb17Q91VD8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms