Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Gm4875-201ENSMUST00000118257 786 ntBASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Gm43703-201ENSMUST00000200523 763 ntBASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Mir125a-201ENSMUST00000083545 68 ntBASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ddx39aQ8VDW0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Gm15653-201ENSMUST00000119247 907 ntBASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ddx39aQ8VDW0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx39aQ8VDW0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ddx39aQ8VDW0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms