Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trpa1Q8BLA8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.27■□□□□ 0.03
Trpa1Q8BLA8 Efs-202ENSMUST00000227037 2540 ntBASIC15.27■□□□□ 0.03
Trpa1Q8BLA8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trpa1Q8BLA8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trpa1Q8BLA8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trpa1Q8BLA8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trpa1Q8BLA8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trpa1Q8BLA8 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.27■□□□□ 0.03
Trpa1Q8BLA8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trpa1Q8BLA8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
Trpa1Q8BLA8 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trpa1Q8BLA8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trpa1Q8BLA8 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trpa1Q8BLA8 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trpa1Q8BLA8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trpa1Q8BLA8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Gm6973-201ENSMUST00000117080 721 ntBASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Gm26308-201ENSMUST00000157768 69 ntBASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Gm44335-201ENSMUST00000196879 141 ntBASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Gm44297-201ENSMUST00000198304 141 ntBASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Gm44346-201ENSMUST00000198851 141 ntBASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trpa1Q8BLA8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trpa1Q8BLA8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.24■□□□□ 0.03
Trpa1Q8BLA8 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.24■□□□□ 0.03
Trpa1Q8BLA8 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trpa1Q8BLA8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trpa1Q8BLA8 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trpa1Q8BLA8 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.24■□□□□ 0.03
Trpa1Q8BLA8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trpa1Q8BLA8 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.24■□□□□ 0.03
Trpa1Q8BLA8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trpa1Q8BLA8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Trpa1Q8BLA8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trpa1Q8BLA8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trpa1Q8BLA8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trpa1Q8BLA8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trpa1Q8BLA8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms