Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim6Q8BGE7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.4■□□□□ 0.06
Trim6Q8BGE7 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
Trim6Q8BGE7 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Gm44357-201ENSMUST00000195897 142 ntBASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Gm19658-201ENSMUST00000196231 138 ntBASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Gm44367-201ENSMUST00000196836 138 ntBASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Gm44350-201ENSMUST00000197197 138 ntBASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Gm44390-201ENSMUST00000197533 144 ntBASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Gm44313-201ENSMUST00000198018 138 ntBASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Gm44486-201ENSMUST00000198508 138 ntBASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Gm44314-201ENSMUST00000199263 138 ntBASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Gm44394-201ENSMUST00000199558 138 ntBASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Gm44484-201ENSMUST00000199873 138 ntBASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Gm44466-201ENSMUST00000200264 138 ntBASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Gm44359-201ENSMUST00000200671 138 ntBASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim6Q8BGE7 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim6Q8BGE7 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim6Q8BGE7 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim6Q8BGE7 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
Trim6Q8BGE7 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.38■□□□□ 0.05
Trim6Q8BGE7 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim6Q8BGE7 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trim6Q8BGE7 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim6Q8BGE7 Gm25990-201ENSMUST00000102440 86 ntBASIC15.38■□□□□ 0.05
Trim6Q8BGE7 Gm7222-201ENSMUST00000117512 906 ntBASIC15.38■□□□□ 0.05
Trim6Q8BGE7 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim6Q8BGE7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Trim6Q8BGE7 Gm5682-201ENSMUST00000173402 505 ntBASIC15.38■□□□□ 0.05
Trim6Q8BGE7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.38■□□□□ 0.05
Trim6Q8BGE7 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.38■□□□□ 0.05
Trim6Q8BGE7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim6Q8BGE7 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim6Q8BGE7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim6Q8BGE7 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.38■□□□□ 0.05
Trim6Q8BGE7 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim6Q8BGE7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim6Q8BGE7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim6Q8BGE7 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim6Q8BGE7 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms