Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Gm15427-201ENSMUST00000117288 531 ntBASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Gm12260-201ENSMUST00000122447 411 ntBASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.19□□□□□ -0.14
Ccdc116Q80X53 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.19□□□□□ -0.14
Ccdc116Q80X53 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc116Q80X53 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Gm45098-201ENSMUST00000207179 657 ntBASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc116Q80X53 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Gm11779-201ENSMUST00000118541 368 ntBASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Gm14042-201ENSMUST00000120139 833 ntBASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 AW822252-206ENSMUST00000208904 237 ntBASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc116Q80X53 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc116Q80X53 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms