Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Scn4bQ7M729 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Scn4bQ7M729 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Gm5479-201ENSMUST00000160578 435 ntBASIC14.12□□□□□ -0.15
Scn4bQ7M729 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.12□□□□□ -0.15
Scn4bQ7M729 Gm9182-201ENSMUST00000217829 639 ntBASIC14.12□□□□□ -0.15
Scn4bQ7M729 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.12□□□□□ -0.15
Scn4bQ7M729 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.12□□□□□ -0.15
Scn4bQ7M729 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn4bQ7M729 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.12□□□□□ -0.15
Scn4bQ7M729 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Scn4bQ7M729 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Scn4bQ7M729 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Gm11594-201ENSMUST00000122313 162 ntBASIC14.1□□□□□ -0.15
Scn4bQ7M729 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Gm37230-201ENSMUST00000194491 818 ntBASIC14.1□□□□□ -0.15
Scn4bQ7M729 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.1□□□□□ -0.15
Scn4bQ7M729 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.1□□□□□ -0.15
Scn4bQ7M729 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn4bQ7M729 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn4bQ7M729 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.09□□□□□ -0.15
Scn4bQ7M729 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn4bQ7M729 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms