Protein–RNA interactions for Protein: Q60764

Mkrn3, Probable E3 ubiquitin-protein ligase makorin-3, mousemouse

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mkrn3Q60764 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mkrn3Q60764 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mkrn3Q60764 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mkrn3Q60764 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Mkrn3Q60764 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Mkrn3Q60764 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Mkrn3Q60764 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Mkrn3Q60764 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mkrn3Q60764 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.33■□□□□ 0.2
Mkrn3Q60764 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.32■□□□□ 0.2
Mkrn3Q60764 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.32■□□□□ 0.2
Mkrn3Q60764 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Gm15483-201ENSMUST00000120338 456 ntBASIC16.32■□□□□ 0.2
Mkrn3Q60764 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.32■□□□□ 0.2
Mkrn3Q60764 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Mkrn3Q60764 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.32■□□□□ 0.2
Mkrn3Q60764 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mkrn3Q60764 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.32■□□□□ 0.2
Mkrn3Q60764 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.32■□□□□ 0.2
Mkrn3Q60764 Gm38247-201ENSMUST00000194675 433 ntBASIC16.32■□□□□ 0.2
Mkrn3Q60764 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.32■□□□□ 0.2
Mkrn3Q60764 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.32■□□□□ 0.2
Mkrn3Q60764 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Mkrn3Q60764 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Mkrn3Q60764 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Mkrn3Q60764 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.31■□□□□ 0.2
Mkrn3Q60764 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mkrn3Q60764 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mkrn3Q60764 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Mkrn3Q60764 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mkrn3Q60764 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mkrn3Q60764 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mkrn3Q60764 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mkrn3Q60764 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mkrn3Q60764 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mkrn3Q60764 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mkrn3Q60764 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mkrn3Q60764 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Mkrn3Q60764 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Mkrn3Q60764 Gm5708-201ENSMUST00000196289 886 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms