Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm7730-201ENSMUST00000212486 454 ntBASIC16.71■□□□□ 0.27
Rc3h1Q4VGL6 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.71■□□□□ 0.27
Rc3h1Q4VGL6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rc3h1Q4VGL6 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rc3h1Q4VGL6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rc3h1Q4VGL6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rc3h1Q4VGL6 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rc3h1Q4VGL6 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rc3h1Q4VGL6 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rc3h1Q4VGL6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rc3h1Q4VGL6 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rc3h1Q4VGL6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rc3h1Q4VGL6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Gm44855-201ENSMUST00000205725 362 ntBASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rc3h1Q4VGL6 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rc3h1Q4VGL6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 AA619741-201ENSMUST00000195095 646 ntBASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Gm6916-202ENSMUST00000205523 195 ntBASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rc3h1Q4VGL6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms