Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Col5a2Q3U962 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col5a2Q3U962 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Col5a2Q3U962 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col5a2Q3U962 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC16.96■□□□□ 0.31
Col5a2Q3U962 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Col5a2Q3U962 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.96■□□□□ 0.31
Col5a2Q3U962 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col5a2Q3U962 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col5a2Q3U962 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col5a2Q3U962 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.96■□□□□ 0.31
Col5a2Q3U962 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col5a2Q3U962 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col5a2Q3U962 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Col5a2Q3U962 Gm4857-201ENSMUST00000192718 785 ntBASIC16.96■□□□□ 0.31
Col5a2Q3U962 Gm38002-201ENSMUST00000193255 180 ntBASIC16.96■□□□□ 0.31
Col5a2Q3U962 Gm37714-201ENSMUST00000194742 342 ntBASIC16.96■□□□□ 0.31
Col5a2Q3U962 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC16.96■□□□□ 0.31
Col5a2Q3U962 Gm19184-201ENSMUST00000196798 928 ntBASIC16.96■□□□□ 0.31
Col5a2Q3U962 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col5a2Q3U962 AC159747.1-201ENSMUST00000219903 265 ntBASIC16.96■□□□□ 0.31
Col5a2Q3U962 Gm18473-201ENSMUST00000220543 868 ntBASIC16.96■□□□□ 0.31
Col5a2Q3U962 Gm45930-201ENSMUST00000221330 292 ntBASIC16.96■□□□□ 0.31
Col5a2Q3U962 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Col5a2Q3U962 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col5a2Q3U962 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col5a2Q3U962 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.96■□□□□ 0.31
Col5a2Q3U962 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col5a2Q3U962 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col5a2Q3U962 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col5a2Q3U962 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col5a2Q3U962 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col5a2Q3U962 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col5a2Q3U962 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col5a2Q3U962 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col5a2Q3U962 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Gm40466-201ENSMUST00000212174 422 ntBASIC16.95■□□□□ 0.3
Col5a2Q3U962 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.95■□□□□ 0.3
Col5a2Q3U962 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Col5a2Q3U962 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Gm13350-201ENSMUST00000120519 479 ntBASIC16.94■□□□□ 0.3
Col5a2Q3U962 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Gm7584-201ENSMUST00000175829 940 ntBASIC16.94■□□□□ 0.3
Col5a2Q3U962 Proscos-202ENSMUST00000178990 666 ntBASIC16.94■□□□□ 0.3
Col5a2Q3U962 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col5a2Q3U962 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.94■□□□□ 0.3
Col5a2Q3U962 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col5a2Q3U962 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col5a2Q3U962 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms