Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Gm42941-201ENSMUST00000200347 1321 ntBASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Gm17040-202ENSMUST00000170597 889 ntBASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Gm24420-201ENSMUST00000176676 59 ntBASIC7.51□□□□□ -1.21
Ush2AQ2QI47 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Gm43916-201ENSMUST00000205062 967 ntBASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Ntng1-201ENSMUST00000051253 327 ntBASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Ush2AQ2QI47 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Gm11354-201ENSMUST00000121974 422 ntBASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Gm8885-201ENSMUST00000189382 598 ntBASIC7.5□□□□□ -1.21
Ush2AQ2QI47 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Gm37042-201ENSMUST00000193816 581 ntBASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 AC167669.2-201ENSMUST00000224417 1620 ntBASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Gm11557-201ENSMUST00000120200 1008 ntBASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Gm8927-201ENSMUST00000181978 981 ntBASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC7.5□□□□□ -1.21
Ush2AQ2QI47 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Mir181d-201ENSMUST00000102383 72 ntBASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Rarb-207ENSMUST00000225921 2756 ntBASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ush2AQ2QI47 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ush2AQ2QI47 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ush2AQ2QI47 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
Ush2AQ2QI47 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ush2AQ2QI47 Mir6546-201ENSMUST00000184460 62 ntBASIC7.49□□□□□ -1.21
Ush2AQ2QI47 Gm19353-201ENSMUST00000184561 445 ntBASIC7.49□□□□□ -1.21
Ush2AQ2QI47 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Ush2AQ2QI47 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ush2AQ2QI47 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ush2AQ2QI47 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ush2AQ2QI47 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ush2AQ2QI47 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ush2AQ2QI47 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ush2AQ2QI47 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ush2AQ2QI47 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ush2AQ2QI47 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC7.49□□□□□ -1.21
Ush2AQ2QI47 Gm24749-201ENSMUST00000157838 343 ntBASIC7.49□□□□□ -1.21
Ush2AQ2QI47 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ush2AQ2QI47 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ush2AQ2QI47 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms