Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.06□□□□□ -0.48
Tff1Q08423 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.06□□□□□ -0.48
Tff1Q08423 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.06□□□□□ -0.48
Tff1Q08423 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Gm18489-201ENSMUST00000172565 551 ntBASIC12.06□□□□□ -0.48
Tff1Q08423 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Gm37153-201ENSMUST00000193637 231 ntBASIC12.06□□□□□ -0.48
Tff1Q08423 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.06□□□□□ -0.48
Tff1Q08423 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.06□□□□□ -0.48
Tff1Q08423 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tff1Q08423 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Tff1Q08423 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tff1Q08423 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tff1Q08423 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Tff1Q08423 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.06□□□□□ -0.48
Tff1Q08423 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tff1Q08423 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.06□□□□□ -0.48
Tff1Q08423 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tff1Q08423 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.05□□□□□ -0.48
Tff1Q08423 Mir8117-201ENSMUST00000184773 107 ntBASIC12.05□□□□□ -0.48
Tff1Q08423 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.05□□□□□ -0.48
Tff1Q08423 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.05□□□□□ -0.48
Tff1Q08423 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Tff1Q08423 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Tff1Q08423 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.05□□□□□ -0.48
Tff1Q08423 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.05□□□□□ -0.48
Tff1Q08423 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tff1Q08423 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tff1Q08423 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tff1Q08423 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tff1Q08423 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tff1Q08423 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tff1Q08423 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tff1Q08423 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.04□□□□□ -0.48
Tff1Q08423 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tff1Q08423 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tff1Q08423 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tff1Q08423 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tff1Q08423 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms