Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf1Q07802 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf1Q07802 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf1Q07802 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf1Q07802 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf1Q07802 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.68□□□□□ -0.06
Ebf1Q07802 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf1Q07802 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf1Q07802 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf1Q07802 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf1Q07802 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf1Q07802 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf1Q07802 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf1Q07802 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf1Q07802 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf1Q07802 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.67□□□□□ -0.06
Ebf1Q07802 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.67□□□□□ -0.06
Ebf1Q07802 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf1Q07802 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf1Q07802 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf1Q07802 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf1Q07802 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf1Q07802 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf1Q07802 Gm15321-201ENSMUST00000121290 288 ntBASIC14.67□□□□□ -0.06
Ebf1Q07802 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.67□□□□□ -0.06
Ebf1Q07802 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ebf1Q07802 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.67□□□□□ -0.06
Ebf1Q07802 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.67□□□□□ -0.06
Ebf1Q07802 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf1Q07802 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf1Q07802 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ebf1Q07802 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf1Q07802 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.67□□□□□ -0.06
Ebf1Q07802 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf1Q07802 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf1Q07802 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf1Q07802 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf1Q07802 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf1Q07802 Celf4-206ENSMUST00000224553 1729 ntBASIC14.66□□□□□ -0.06
Ebf1Q07802 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf1Q07802 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf1Q07802 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ebf1Q07802 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf1Q07802 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf1Q07802 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf1Q07802 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf1Q07802 Gm14127-201ENSMUST00000117906 678 ntBASIC14.66□□□□□ -0.06
Ebf1Q07802 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.66□□□□□ -0.06
Ebf1Q07802 Gm12490-201ENSMUST00000120255 560 ntBASIC14.66□□□□□ -0.06
Ebf1Q07802 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.66□□□□□ -0.06
Ebf1Q07802 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ebf1Q07802 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf1Q07802 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.66□□□□□ -0.06
Ebf1Q07802 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.66□□□□□ -0.06
Ebf1Q07802 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.66□□□□□ -0.06
Ebf1Q07802 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Ebf1Q07802 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.66□□□□□ -0.06
Ebf1Q07802 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.66□□□□□ -0.06
Ebf1Q07802 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ebf1Q07802 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf1Q07802 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf1Q07802 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf1Q07802 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf1Q07802 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf1Q07802 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ebf1Q07802 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf1Q07802 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf1Q07802 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf1Q07802 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.65□□□□□ -0.06
Ebf1Q07802 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.65□□□□□ -0.06
Ebf1Q07802 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.65□□□□□ -0.06
Ebf1Q07802 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Ebf1Q07802 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Ebf1Q07802 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Ebf1Q07802 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ebf1Q07802 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ebf1Q07802 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.65□□□□□ -0.06
Ebf1Q07802 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms