Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Mir8102-201ENSMUST00000184148 139 ntBASIC14.28□□□□□ -0.12
SgcgP82348 Mir6977-201ENSMUST00000184960 64 ntBASIC14.28□□□□□ -0.12
SgcgP82348 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SgcgP82348 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SgcgP82348 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcgP82348 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcgP82348 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcgP82348 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcgP82348 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcgP82348 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcgP82348 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcgP82348 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SgcgP82348 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcgP82348 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcgP82348 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.27□□□□□ -0.12
SgcgP82348 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcgP82348 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcgP82348 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcgP82348 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SgcgP82348 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SgcgP82348 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SgcgP82348 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcgP82348 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SgcgP82348 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.27□□□□□ -0.13
SgcgP82348 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.27□□□□□ -0.13
SgcgP82348 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SgcgP82348 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SgcgP82348 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcgP82348 Gm27631-201ENSMUST00000184163 466 ntBASIC14.27□□□□□ -0.13
SgcgP82348 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SgcgP82348 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.27□□□□□ -0.13
SgcgP82348 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SgcgP82348 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.27□□□□□ -0.13
SgcgP82348 Gm7775-201ENSMUST00000218871 853 ntBASIC14.27□□□□□ -0.13
SgcgP82348 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcgP82348 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcgP82348 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcgP82348 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.27□□□□□ -0.13
SgcgP82348 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
SgcgP82348 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcgP82348 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcgP82348 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcgP82348 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcgP82348 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcgP82348 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.27□□□□□ -0.13
SgcgP82348 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.27□□□□□ -0.13
SgcgP82348 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SgcgP82348 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SgcgP82348 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
SgcgP82348 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.26□□□□□ -0.13
SgcgP82348 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.26□□□□□ -0.13
SgcgP82348 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SgcgP82348 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.26□□□□□ -0.13
SgcgP82348 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.26□□□□□ -0.13
SgcgP82348 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcgP82348 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
SgcgP82348 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcgP82348 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcgP82348 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcgP82348 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.25□□□□□ -0.13
SgcgP82348 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcgP82348 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcgP82348 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SgcgP82348 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SgcgP82348 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SgcgP82348 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcgP82348 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcgP82348 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SgcgP82348 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcgP82348 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcgP82348 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
SgcgP82348 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcgP82348 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SgcgP82348 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SgcgP82348 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcgP82348 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms