Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Ldb1P70662 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ldb1P70662 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ldb1P70662 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.45□□□□□ -0.1
Ldb1P70662 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.45□□□□□ -0.1
Ldb1P70662 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ldb1P70662 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ldb1P70662 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ldb1P70662 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ldb1P70662 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ldb1P70662 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.44□□□□□ -0.1
Ldb1P70662 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.44□□□□□ -0.1
Ldb1P70662 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.44□□□□□ -0.1
Ldb1P70662 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ldb1P70662 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ldb1P70662 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.44□□□□□ -0.1
Ldb1P70662 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb1P70662 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.43□□□□□ -0.1
Ldb1P70662 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ldb1P70662 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ldb1P70662 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Ldb1P70662 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ldb1P70662 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ldb1P70662 Gm6973-201ENSMUST00000117080 721 ntBASIC14.43□□□□□ -0.1
Ldb1P70662 Gm11594-201ENSMUST00000122313 162 ntBASIC14.43□□□□□ -0.1
Ldb1P70662 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.43□□□□□ -0.1
Ldb1P70662 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Gm5479-201ENSMUST00000160578 435 ntBASIC14.43□□□□□ -0.1
Ldb1P70662 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.43□□□□□ -0.1
Ldb1P70662 Gm27920-201ENSMUST00000183953 96 ntBASIC14.43□□□□□ -0.1
Ldb1P70662 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.43□□□□□ -0.1
Ldb1P70662 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.43□□□□□ -0.1
Ldb1P70662 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.43□□□□□ -0.1
Ldb1P70662 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ldb1P70662 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb1P70662 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ldb1P70662 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Ldb1P70662 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb1P70662 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb1P70662 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb1P70662 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb1P70662 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.42□□□□□ -0.1
Ldb1P70662 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ldb1P70662 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb1P70662 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.42□□□□□ -0.1
Ldb1P70662 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb1P70662 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.42□□□□□ -0.1
Ldb1P70662 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Ldb1P70662 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms