Protein–RNA interactions for Protein: P54775

Psmc4, 26S proteasome regulatory subunit 6B, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc4P54775 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc4P54775 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc4P54775 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc4P54775 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc4P54775 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc4P54775 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.42■□□□□ 0.22
Psmc4P54775 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc4P54775 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc4P54775 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC16.42■□□□□ 0.22
Psmc4P54775 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.42■□□□□ 0.22
Psmc4P54775 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.42■□□□□ 0.22
Psmc4P54775 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc4P54775 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.42■□□□□ 0.22
Psmc4P54775 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.42■□□□□ 0.22
Psmc4P54775 Gm27892-201ENSMUST00000185017 106 ntBASIC16.42■□□□□ 0.22
Psmc4P54775 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.42■□□□□ 0.22
Psmc4P54775 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.42■□□□□ 0.22
Psmc4P54775 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.42■□□□□ 0.22
Psmc4P54775 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc4P54775 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc4P54775 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc4P54775 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc4P54775 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Psmc4P54775 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc4P54775 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.42■□□□□ 0.22
Psmc4P54775 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc4P54775 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc4P54775 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc4P54775 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc4P54775 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc4P54775 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc4P54775 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc4P54775 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc4P54775 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Psmc4P54775 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Psmc4P54775 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Psmc4P54775 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Psmc4P54775 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Psmc4P54775 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Psmc4P54775 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Psmc4P54775 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Psmc4P54775 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Psmc4P54775 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Psmc4P54775 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.41■□□□□ 0.22
Psmc4P54775 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Psmc4P54775 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Psmc4P54775 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Psmc4P54775 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Psmc4P54775 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Psmc4P54775 Gm4984-201ENSMUST00000115987 360 ntBASIC16.41■□□□□ 0.22
Psmc4P54775 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.41■□□□□ 0.22
Psmc4P54775 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Psmc4P54775 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.41■□□□□ 0.22
Psmc4P54775 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.41■□□□□ 0.22
Psmc4P54775 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.41■□□□□ 0.22
Psmc4P54775 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Psmc4P54775 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Psmc4P54775 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Psmc4P54775 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Psmc4P54775 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Psmc4P54775 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Psmc4P54775 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Psmc4P54775 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.41■□□□□ 0.22
Psmc4P54775 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Psmc4P54775 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Psmc4P54775 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Psmc4P54775 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Psmc4P54775 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Psmc4P54775 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Psmc4P54775 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.4■□□□□ 0.22
Psmc4P54775 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Psmc4P54775 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Psmc4P54775 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Psmc4P54775 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Psmc4P54775 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Psmc4P54775 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Psmc4P54775 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Psmc4P54775 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Psmc4P54775 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Psmc4P54775 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Psmc4P54775 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Psmc4P54775 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Psmc4P54775 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.4■□□□□ 0.22
Psmc4P54775 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.4■□□□□ 0.22
Psmc4P54775 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.4■□□□□ 0.22
Psmc4P54775 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Psmc4P54775 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Psmc4P54775 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Psmc4P54775 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Psmc4P54775 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Psmc4P54775 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Psmc4P54775 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Psmc4P54775 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Psmc4P54775 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Psmc4P54775 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Psmc4P54775 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Psmc4P54775 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Psmc4P54775 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Psmc4P54775 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.4■□□□□ 0.22
Psmc4P54775 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms