Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
Nkx2-1P50220 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx2-1P50220 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.48
Nkx2-1P50220 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.02□□□□□ -0.49
Nkx2-1P50220 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Gm7506-201ENSMUST00000207758 815 ntBASIC12.02□□□□□ -0.49
Nkx2-1P50220 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-1P50220 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-1P50220 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nkx2-1P50220 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.01□□□□□ -0.49
Nkx2-1P50220 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-1P50220 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nkx2-1P50220 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nkx2-1P50220 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Nkx2-1P50220 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Nkx2-1P50220 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12□□□□□ -0.49
Nkx2-1P50220 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12□□□□□ -0.49
Nkx2-1P50220 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12□□□□□ -0.49
Nkx2-1P50220 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12□□□□□ -0.49
Nkx2-1P50220 Gm21362-201ENSMUST00000194272 928 ntBASIC12□□□□□ -0.49
Nkx2-1P50220 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12□□□□□ -0.49
Nkx2-1P50220 AC155729.1-201ENSMUST00000227758 544 ntBASIC12□□□□□ -0.49
Nkx2-1P50220 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-1P50220 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms