Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm29269-201ENSMUST00000190087 696 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Gm21722-201ENSMUST00000190153 696 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Gm28423-201ENSMUST00000190701 696 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Gm21899-201ENSMUST00000190745 696 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Gm21910-201ENSMUST00000191163 696 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Gm21849-201ENSMUST00000191571 696 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Gm28678-201ENSMUST00000191593 696 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Gm20910-201ENSMUST00000193268 696 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col8a2P25318 Gm21871-201ENSMUST00000194621 696 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Shd-206ENSMUST00000225145 998 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col8a2P25318 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col8a2P25318 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col8a2P25318 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Col8a2P25318 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col8a2P25318 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col8a2P25318 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col8a2P25318 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col8a2P25318 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col8a2P25318 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col8a2P25318 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col8a2P25318 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col8a2P25318 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.1□□□□□ -0.47
Col8a2P25318 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col8a2P25318 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col8a2P25318 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col8a2P25318 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col8a2P25318 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col8a2P25318 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col8a2P25318 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Col8a2P25318 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.09□□□□□ -0.47
Col8a2P25318 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col8a2P25318 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col8a2P25318 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.09□□□□□ -0.47
Col8a2P25318 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col8a2P25318 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col8a2P25318 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col8a2P25318 Mir1897-201ENSMUST00000122581 272 ntBASIC12.09□□□□□ -0.47
Col8a2P25318 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.09□□□□□ -0.47
Col8a2P25318 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col8a2P25318 Gm18737-201ENSMUST00000173594 937 ntBASIC12.09□□□□□ -0.47
Col8a2P25318 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Col8a2P25318 Gm27533-201ENSMUST00000183800 152 ntBASIC12.09□□□□□ -0.47
Col8a2P25318 Gm27989-201ENSMUST00000184721 107 ntBASIC12.09□□□□□ -0.47
Col8a2P25318 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col8a2P25318 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col8a2P25318 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.09□□□□□ -0.47
Col8a2P25318 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.09□□□□□ -0.47
Col8a2P25318 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.09□□□□□ -0.47
Col8a2P25318 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col8a2P25318 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col8a2P25318 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col8a2P25318 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col8a2P25318 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col8a2P25318 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.09□□□□□ -0.47
Col8a2P25318 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col8a2P25318 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col8a2P25318 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.09□□□□□ -0.47
Col8a2P25318 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col8a2P25318 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col8a2P25318 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.09□□□□□ -0.47
Col8a2P25318 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col8a2P25318 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Col8a2P25318 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Col8a2P25318 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Col8a2P25318 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Col8a2P25318 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.08□□□□□ -0.48
Col8a2P25318 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.08□□□□□ -0.48
Col8a2P25318 Gm12428-201ENSMUST00000119844 727 ntBASIC12.08□□□□□ -0.48
Col8a2P25318 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.08□□□□□ -0.48
Col8a2P25318 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.08□□□□□ -0.48
Col8a2P25318 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col8a2P25318 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Col8a2P25318 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.08□□□□□ -0.48
Col8a2P25318 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.08□□□□□ -0.48
Col8a2P25318 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms