Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.62■□□□□ 0.73
COL11A1P12107 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.62■□□□□ 0.73
COL11A1P12107 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A1P12107 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.62■□□□□ 0.73
COL11A1P12107 AL009183.1-201ENST00000603760 355 ntBASIC19.62■□□□□ 0.73
COL11A1P12107 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A1P12107 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.62■□□□□ 0.73
COL11A1P12107 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
COL11A1P12107 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A1P12107 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A1P12107 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
COL11A1P12107 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A1P12107 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL11A1P12107 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.61■□□□□ 0.73
COL11A1P12107 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.61■□□□□ 0.73
COL11A1P12107 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL11A1P12107 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL11A1P12107 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.61■□□□□ 0.73
COL11A1P12107 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
COL11A1P12107 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.61■□□□□ 0.73
COL11A1P12107 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL11A1P12107 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL11A1P12107 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.61■□□□□ 0.73
COL11A1P12107 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.61■□□□□ 0.73
COL11A1P12107 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.61■□□□□ 0.73
COL11A1P12107 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
COL11A1P12107 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.61■□□□□ 0.73
COL11A1P12107 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.61■□□□□ 0.73
COL11A1P12107 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.61■□□□□ 0.73
COL11A1P12107 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.61■□□□□ 0.73
COL11A1P12107 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
COL11A1P12107 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL11A1P12107 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.61■□□□□ 0.73
COL11A1P12107 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL11A1P12107 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
COL11A1P12107 AC133963.1-201ENST00000504166 1679 ntBASIC19.61■□□□□ 0.73
COL11A1P12107 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL11A1P12107 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.61■□□□□ 0.73
COL11A1P12107 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL11A1P12107 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
COL11A1P12107 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL11A1P12107 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL11A1P12107 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL11A1P12107 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COL11A1P12107 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL11A1P12107 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL11A1P12107 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL11A1P12107 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COL11A1P12107 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.6■□□□□ 0.73
COL11A1P12107 AL355306.1-201ENST00000415580 579 ntBASIC19.6■□□□□ 0.73
COL11A1P12107 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COL11A1P12107 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.6■□□□□ 0.73
COL11A1P12107 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL11A1P12107 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL11A1P12107 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
COL11A1P12107 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.6■□□□□ 0.73
COL11A1P12107 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
COL11A1P12107 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
COL11A1P12107 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL11A1P12107 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL11A1P12107 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL11A1P12107 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL11A1P12107 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
COL11A1P12107 TFAMP1-201ENST00000412727 736 ntBASIC19.6■□□□□ 0.73
COL11A1P12107 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL11A1P12107 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.6■□□□□ 0.73
COL11A1P12107 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COL11A1P12107 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.6■□□□□ 0.73
COL11A1P12107 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL11A1P12107 DUX4L17-201ENST00000557360 1267 ntBASIC19.6■□□□□ 0.73
COL11A1P12107 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COL11A1P12107 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.6■□□□□ 0.73
COL11A1P12107 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL11A1P12107 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.59■□□□□ 0.73
COL11A1P12107 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL11A1P12107 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL11A1P12107 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL11A1P12107 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL11A1P12107 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL11A1P12107 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.59■□□□□ 0.73
COL11A1P12107 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.59■□□□□ 0.73
COL11A1P12107 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.59■□□□□ 0.73
COL11A1P12107 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
COL11A1P12107 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.59■□□□□ 0.73
COL11A1P12107 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
COL11A1P12107 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
COL11A1P12107 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL11A1P12107 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL11A1P12107 AC008764.6-201ENST00000595909 2069 ntBASIC19.59■□□□□ 0.73
COL11A1P12107 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL11A1P12107 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.58■□□□□ 0.73
COL11A1P12107 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
COL11A1P12107 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
COL11A1P12107 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL11A1P12107 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL11A1P12107 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.58■□□□□ 0.73
COL11A1P12107 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.58■□□□□ 0.73
COL11A1P12107 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.58■□□□□ 0.73
COL11A1P12107 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.58■□□□□ 0.73
COL11A1P12107 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms