Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NclP09405 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NclP09405 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NclP09405 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NclP09405 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NclP09405 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NclP09405 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NclP09405 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NclP09405 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NclP09405 Gm23547-201ENSMUST00000158210 271 ntBASIC21.47■■□□□ 1.03
NclP09405 Gm7730-201ENSMUST00000212486 454 ntBASIC21.47■■□□□ 1.03
NclP09405 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NclP09405 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NclP09405 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
NclP09405 Gm2423-201ENSMUST00000074863 733 ntBASIC21.47■■□□□ 1.03
NclP09405 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NclP09405 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
NclP09405 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NclP09405 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NclP09405 Syt7-204ENSMUST00000223586 1344 ntBASIC21.47■■□□□ 1.03
NclP09405 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
NclP09405 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NclP09405 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
NclP09405 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
NclP09405 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
NclP09405 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
NclP09405 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NclP09405 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NclP09405 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
NclP09405 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NclP09405 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NclP09405 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NclP09405 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NclP09405 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NclP09405 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC21.46■■□□□ 1.03
NclP09405 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
NclP09405 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC21.46■■□□□ 1.03
NclP09405 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC21.46■■□□□ 1.03
NclP09405 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NclP09405 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NclP09405 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NclP09405 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NclP09405 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
NclP09405 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC21.46■■□□□ 1.03
NclP09405 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC21.46■■□□□ 1.03
NclP09405 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NclP09405 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NclP09405 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NclP09405 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
NclP09405 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NclP09405 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NclP09405 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NclP09405 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NclP09405 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NclP09405 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NclP09405 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
NclP09405 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC21.45■■□□□ 1.02
NclP09405 Cd63-ps-201ENSMUST00000145417 875 ntBASIC21.45■■□□□ 1.02
NclP09405 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NclP09405 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NclP09405 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NclP09405 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NclP09405 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
NclP09405 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NclP09405 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NclP09405 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NclP09405 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NclP09405 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NclP09405 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
NclP09405 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NclP09405 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NclP09405 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
NclP09405 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
NclP09405 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NclP09405 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC21.44■■□□□ 1.02
NclP09405 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NclP09405 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NclP09405 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NclP09405 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC21.44■■□□□ 1.02
NclP09405 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC21.44■■□□□ 1.02
NclP09405 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NclP09405 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
NclP09405 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NclP09405 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NclP09405 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NclP09405 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NclP09405 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NclP09405 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NclP09405 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
NclP09405 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NclP09405 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NclP09405 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NclP09405 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NclP09405 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NclP09405 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC21.43■■□□□ 1.02
NclP09405 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NclP09405 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NclP09405 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NclP09405 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NclP09405 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms