Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P03980 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.19□□□□□ -0.62
P03980 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
P03980 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.19□□□□□ -0.62
P03980 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
P03980 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
P03980 Gm33142-201ENSMUST00000193913 867 ntBASIC11.19□□□□□ -0.62
P03980 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.19□□□□□ -0.62
P03980 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
P03980 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.19□□□□□ -0.62
P03980 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC11.19□□□□□ -0.62
P03980 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.19□□□□□ -0.62
P03980 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
P03980 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.19□□□□□ -0.62
P03980 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P03980 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
P03980 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
P03980 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
P03980 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
P03980 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
P03980 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
P03980 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Gm13464-201ENSMUST00000119418 935 ntBASIC11.18□□□□□ -0.62
P03980 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
P03980 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.18□□□□□ -0.62
P03980 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.18□□□□□ -0.62
P03980 Gm6089-201ENSMUST00000197666 938 ntBASIC11.18□□□□□ -0.62
P03980 Gm7787-201ENSMUST00000216858 688 ntBASIC11.18□□□□□ -0.62
P03980 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.18□□□□□ -0.62
P03980 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.18□□□□□ -0.62
P03980 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.18□□□□□ -0.62
P03980 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
P03980 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.18□□□□□ -0.62
P03980 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P03980 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.18□□□□□ -0.62
P03980 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
P03980 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P03980 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P03980 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P03980 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
P03980 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P03980 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.17□□□□□ -0.62
P03980 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
P03980 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P03980 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms