Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.26□□□□□ -0.29
P01852 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01852 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P01852 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
P01852 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.26□□□□□ -0.29
P01852 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P01852 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01852 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01852 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01852 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01852 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01852 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01852 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01852 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
P01852 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01852 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P01852 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01852 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P01852 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P01852 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
P01852 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01852 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01852 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01852 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
P01852 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.25□□□□□ -0.29
P01852 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01852 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01852 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
P01852 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01852 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
P01852 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01852 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
P01852 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.25□□□□□ -0.29
P01852 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01852 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
P01852 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
P01852 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.25□□□□□ -0.29
P01852 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.25□□□□□ -0.29
P01852 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
P01852 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01852 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.25□□□□□ -0.29
P01852 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.25□□□□□ -0.29
P01852 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.25□□□□□ -0.29
P01852 Gm38225-201ENSMUST00000194001 393 ntBASIC13.25□□□□□ -0.29
P01852 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
P01852 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.25□□□□□ -0.29
P01852 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
P01852 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
P01852 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01852 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01852 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01852 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01852 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01852 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
P01852 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
P01852 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
P01852 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.24□□□□□ -0.29
P01852 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01852 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.24□□□□□ -0.29
P01852 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01852 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
P01852 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01852 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01852 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01852 Gm22065-201ENSMUST00000103753 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm22066-201ENSMUST00000103761 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm24932-201ENSMUST00000103763 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm24115-201ENSMUST00000103799 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm22190-201ENSMUST00000103827 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm22191-201ENSMUST00000103831 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm24721-201ENSMUST00000103849 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm28018-201ENSMUST00000103869 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm26399-201ENSMUST00000103937 110 ntBASIC13.24□□□□□ -0.29
P01852 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P01852 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P01852 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.24□□□□□ -0.29
P01852 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P01852 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.24□□□□□ -0.29
P01852 Gm25349-201ENSMUST00000177728 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm23616-201ENSMUST00000177797 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm25871-201ENSMUST00000177816 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm24752-201ENSMUST00000178240 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm24496-201ENSMUST00000178287 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm25649-201ENSMUST00000178476 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm25548-201ENSMUST00000178681 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm23147-201ENSMUST00000178841 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm26095-201ENSMUST00000179270 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm22171-201ENSMUST00000179283 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm23936-201ENSMUST00000179354 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm22619-201ENSMUST00000179516 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm25255-201ENSMUST00000179579 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm24755-201ENSMUST00000179691 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm26506-201ENSMUST00000179692 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm25086-201ENSMUST00000179931 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm23243-201ENSMUST00000180047 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm24659-201ENSMUST00000180212 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm24169-201ENSMUST00000180244 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm23689-201ENSMUST00000180354 110 ntBASIC13.24□□□□□ -0.29
P01852 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.24□□□□□ -0.29
P01852 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms