Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Hcn1O88704 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Hcn1O88704 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn1O88704 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn1O88704 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn1O88704 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn1O88704 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn1O88704 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn1O88704 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn1O88704 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn1O88704 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn1O88704 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn1O88704 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn1O88704 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn1O88704 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn1O88704 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.89□□□□□ -0.19
Hcn1O88704 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.89□□□□□ -0.19
Hcn1O88704 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.89□□□□□ -0.19
Hcn1O88704 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Hcn1O88704 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.89□□□□□ -0.19
Hcn1O88704 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.89□□□□□ -0.19
Hcn1O88704 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.89□□□□□ -0.19
Hcn1O88704 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn1O88704 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.89□□□□□ -0.19
Hcn1O88704 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.89□□□□□ -0.19
Hcn1O88704 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Hcn1O88704 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn1O88704 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn1O88704 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn1O88704 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn1O88704 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn1O88704 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn1O88704 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn1O88704 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Hcn1O88704 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hcn1O88704 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Hcn1O88704 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Hcn1O88704 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Hcn1O88704 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.88□□□□□ -0.19
Hcn1O88704 Gm24513-201ENSMUST00000174964 138 ntBASIC13.88□□□□□ -0.19
Hcn1O88704 Gm27301-201ENSMUST00000184012 127 ntBASIC13.88□□□□□ -0.19
Hcn1O88704 Gm27397-201ENSMUST00000184997 107 ntBASIC13.88□□□□□ -0.19
Hcn1O88704 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Hcn1O88704 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Hcn1O88704 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Hcn1O88704 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.88□□□□□ -0.19
Hcn1O88704 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Hcn1O88704 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.88□□□□□ -0.19
Hcn1O88704 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Hcn1O88704 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hcn1O88704 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Hcn1O88704 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 Carlr-201ENSMUST00000181515 2574 ntBASIC13.87□□□□□ -0.19
Hcn1O88704 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Hcn1O88704 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Hcn1O88704 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Hcn1O88704 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 Gm14822-201ENSMUST00000122247 291 ntBASIC13.87□□□□□ -0.19
Hcn1O88704 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms