Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Efnb3O35393 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Efnb3O35393 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.46□□□□□ -0.58
Efnb3O35393 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Efnb3O35393 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Efnb3O35393 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.46□□□□□ -0.58
Efnb3O35393 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Efnb3O35393 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Efnb3O35393 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Efnb3O35393 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Efnb3O35393 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Efnb3O35393 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Efnb3O35393 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.45□□□□□ -0.58
Efnb3O35393 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.45□□□□□ -0.58
Efnb3O35393 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.45□□□□□ -0.58
Efnb3O35393 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.45□□□□□ -0.58
Efnb3O35393 Gm18489-201ENSMUST00000172565 551 ntBASIC11.45□□□□□ -0.58
Efnb3O35393 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.45□□□□□ -0.58
Efnb3O35393 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.45□□□□□ -0.58
Efnb3O35393 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Efnb3O35393 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Efnb3O35393 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Efnb3O35393 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.45□□□□□ -0.58
Efnb3O35393 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Efnb3O35393 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Efnb3O35393 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Efnb3O35393 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Efnb3O35393 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Efnb3O35393 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Efnb3O35393 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.44□□□□□ -0.58
Efnb3O35393 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Efnb3O35393 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Gm27741-201ENSMUST00000185060 237 ntBASIC11.44□□□□□ -0.58
Efnb3O35393 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.44□□□□□ -0.58
Efnb3O35393 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Efnb3O35393 Rps4l-201ENSMUST00000071745 943 ntBASIC11.44□□□□□ -0.58
Efnb3O35393 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Efnb3O35393 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.44□□□□□ -0.58
Efnb3O35393 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.44□□□□□ -0.58
Efnb3O35393 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.44□□□□□ -0.58
Efnb3O35393 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Efnb3O35393 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.43□□□□□ -0.58
Efnb3O35393 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Efnb3O35393 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms