Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Gm13015-201ENSMUST00000118674 204 ntBASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Gm26308-201ENSMUST00000157768 69 ntBASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Gm10275-202ENSMUST00000168697 495 ntBASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Gm10275-201ENSMUST00000092620 635 ntBASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4lE9Q2N0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4lE9Q2N0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4lE9Q2N0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4lE9Q2N0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cpsf4lE9Q2N0 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4lE9Q2N0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4lE9Q2N0 Gm22065-201ENSMUST00000103753 110 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms