Protein–RNA interactions for Protein: A2A259

Pkd2l1, Polycystic kidney disease 2-like 1 protein, mousemouse

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd2l1A2A259 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pkd2l1A2A259 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.2□□□□□ -0.14
Pkd2l1A2A259 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pkd2l1A2A259 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pkd2l1A2A259 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pkd2l1A2A259 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Pkd2l1A2A259 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pkd2l1A2A259 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.2□□□□□ -0.14
Pkd2l1A2A259 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pkd2l1A2A259 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.2□□□□□ -0.14
Pkd2l1A2A259 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pkd2l1A2A259 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pkd2l1A2A259 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pkd2l1A2A259 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pkd2l1A2A259 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pkd2l1A2A259 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pkd2l1A2A259 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pkd2l1A2A259 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pkd2l1A2A259 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Gm12008-201ENSMUST00000117791 755 ntBASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Gm20553-201ENSMUST00000204205 844 ntBASIC14.19□□□□□ -0.14
Pkd2l1A2A259 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pkd2l1A2A259 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Gm8318-201ENSMUST00000182954 872 ntBASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkd2l1A2A259 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd2l1A2A259 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd2l1A2A259 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pkd2l1A2A259 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd2l1A2A259 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd2l1A2A259 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Pkd2l1A2A259 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.17□□□□□ -0.14
Pkd2l1A2A259 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pkd2l1A2A259 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd2l1A2A259 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd2l1A2A259 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd2l1A2A259 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Pkd2l1A2A259 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd2l1A2A259 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd2l1A2A259 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd2l1A2A259 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd2l1A2A259 Rprl2-201ENSMUST00000157150 290 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms