Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Gm16026-204ENSMUST00000162652 683 ntBASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-1A0N8R1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Gm27300-201ENSMUST00000184085 97 ntBASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Gm27335-201ENSMUST00000184758 97 ntBASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Gm7977-201ENSMUST00000193787 748 ntBASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Gm21362-201ENSMUST00000194272 928 ntBASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav12-1A0N8R1 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav12-1A0N8R1 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav12-1A0N8R1 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-1A0N8R1 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms