Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm37584-201ENSMUST00000193595 1290 ntBASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 AC117588.1-201ENSMUST00000228510 999 ntBASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm12626-201ENSMUST00000117339 1983 ntBASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm12623-201ENSMUST00000119849 1983 ntBASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Ssr1-204ENSMUST00000225319 1610 ntBASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav6n-6A0A075B6B2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.67
Trav6n-6A0A075B6B2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 AC164629.2-201ENSMUST00000217916 270 ntBASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav6n-6A0A075B6B2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm11452-201ENSMUST00000122376 690 ntBASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms