Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Cdh17Q9R100 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cdh17Q9R100 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Gm27301-201ENSMUST00000184012 127 ntBASIC14.14□□□□□ -0.15
Cdh17Q9R100 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Gm45098-201ENSMUST00000207179 657 ntBASIC14.14□□□□□ -0.15
Cdh17Q9R100 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh17Q9R100 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh17Q9R100 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh17Q9R100 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh17Q9R100 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cdh17Q9R100 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cdh17Q9R100 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.12□□□□□ -0.15
Cdh17Q9R100 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.12□□□□□ -0.15
Cdh17Q9R100 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Gm14140-201ENSMUST00000119999 995 ntBASIC14.12□□□□□ -0.15
Cdh17Q9R100 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Gm45747-201ENSMUST00000212203 999 ntBASIC14.12□□□□□ -0.15
Cdh17Q9R100 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdh17Q9R100 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms