Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc7Q9D541 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc7Q9D541 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc7Q9D541 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc7Q9D541 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc7Q9D541 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc7Q9D541 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc7Q9D541 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc7Q9D541 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc7Q9D541 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc7Q9D541 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc7Q9D541 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc7Q9D541 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Gm9727-201ENSMUST00000161387 555 ntBASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Gm20553-201ENSMUST00000204205 844 ntBASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc7Q9D541 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Gm44492-201ENSMUST00000197012 141 ntBASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Mzt1-203ENSMUST00000227948 952 ntBASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc7Q9D541 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.92■□□□□ 0.3
Ccdc7Q9D541 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc7Q9D541 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc7Q9D541 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Ccdc7Q9D541 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc7Q9D541 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc7Q9D541 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc7Q9D541 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc7Q9D541 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc7Q9D541 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc7Q9D541 Gm15427-201ENSMUST00000117288 531 ntBASIC16.92■□□□□ 0.3
Ccdc7Q9D541 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.92■□□□□ 0.3
Ccdc7Q9D541 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc7Q9D541 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.92■□□□□ 0.3
Ccdc7Q9D541 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc7Q9D541 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Ccdc7Q9D541 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc7Q9D541 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.92■□□□□ 0.3
Ccdc7Q9D541 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc7Q9D541 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc7Q9D541 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc7Q9D541 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc7Q9D541 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms