Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chaf1bQ9D0N7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Chaf1bQ9D0N7 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Chaf1bQ9D0N7 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
Chaf1bQ9D0N7 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.65□□□□□ -0.23
Chaf1bQ9D0N7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Chaf1bQ9D0N7 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chaf1bQ9D0N7 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chaf1bQ9D0N7 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chaf1bQ9D0N7 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chaf1bQ9D0N7 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chaf1bQ9D0N7 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chaf1bQ9D0N7 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Chaf1bQ9D0N7 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chaf1bQ9D0N7 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Chaf1bQ9D0N7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chaf1bQ9D0N7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chaf1bQ9D0N7 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chaf1bQ9D0N7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Chaf1bQ9D0N7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chaf1bQ9D0N7 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Chaf1bQ9D0N7 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms