Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd1Q9D0E3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd1Q9D0E3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd1Q9D0E3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.32■□□□□ 0.04
Lysmd1Q9D0E3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.32■□□□□ 0.04
Lysmd1Q9D0E3 Celf4-206ENSMUST00000224553 1729 ntBASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Gm12485-201ENSMUST00000119641 291 ntBASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Gm11658-201ENSMUST00000120913 1008 ntBASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 n-R5s14-201ENSMUST00000122688 107 ntBASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Olfr286-202ENSMUST00000205305 969 ntBASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd1Q9D0E3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Gm3756-201ENSMUST00000169182 1355 ntBASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Gm5869-201ENSMUST00000200248 1257 ntBASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Gm9279-201ENSMUST00000223175 1606 ntBASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd1Q9D0E3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd1Q9D0E3 Dancr-204ENSMUST00000132389 2347 ntBASIC15.29■□□□□ 0.04
Lysmd1Q9D0E3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd1Q9D0E3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd1Q9D0E3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd1Q9D0E3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.29■□□□□ 0.04
Lysmd1Q9D0E3 Gm16397-201ENSMUST00000122201 494 ntBASIC15.29■□□□□ 0.04
Lysmd1Q9D0E3 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC15.29■□□□□ 0.04
Lysmd1Q9D0E3 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Lysmd1Q9D0E3 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd1Q9D0E3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.29■□□□□ 0.04
Lysmd1Q9D0E3 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Lysmd1Q9D0E3 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.29■□□□□ 0.04
Lysmd1Q9D0E3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Lysmd1Q9D0E3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.29■□□□□ 0.04
Lysmd1Q9D0E3 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.29■□□□□ 0.04
Lysmd1Q9D0E3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd1Q9D0E3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd1Q9D0E3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms