Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tpgs1Q99MS8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tpgs1Q99MS8 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tpgs1Q99MS8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tpgs1Q99MS8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tpgs1Q99MS8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tpgs1Q99MS8 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Gm27622-201ENSMUST00000183779 60 ntBASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Tpgs1Q99MS8 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tpgs1Q99MS8 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Tpgs1Q99MS8 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tpgs1Q99MS8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Tpgs1Q99MS8 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tpgs1Q99MS8 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tpgs1Q99MS8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Tpgs1Q99MS8 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.08■□□□□ 0
Tpgs1Q99MS8 Gm15957-201ENSMUST00000118893 974 ntBASIC15.08■□□□□ 0
Tpgs1Q99MS8 Gm15920-201ENSMUST00000118998 402 ntBASIC15.08■□□□□ 0
Tpgs1Q99MS8 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.08■□□□□ 0
Tpgs1Q99MS8 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.08■□□□□ 0
Tpgs1Q99MS8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Tpgs1Q99MS8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.08■□□□□ 0
Tpgs1Q99MS8 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Tpgs1Q99MS8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Tpgs1Q99MS8 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tpgs1Q99MS8 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tpgs1Q99MS8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tpgs1Q99MS8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.08■□□□□ 0
Tpgs1Q99MS8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Tpgs1Q99MS8 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Tpgs1Q99MS8 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tpgs1Q99MS8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tpgs1Q99MS8 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.07■□□□□ 0
Tpgs1Q99MS8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.07■□□□□ 0
Tpgs1Q99MS8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.07■□□□□ 0
Tpgs1Q99MS8 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Gm44608-201ENSMUST00000206827 855 ntBASIC15.07■□□□□ 0
Tpgs1Q99MS8 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Gm16476-201ENSMUST00000221544 139 ntBASIC15.07■□□□□ 0
Tpgs1Q99MS8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tpgs1Q99MS8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tpgs1Q99MS8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tpgs1Q99MS8 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tpgs1Q99MS8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tpgs1Q99MS8 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tpgs1Q99MS8 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tpgs1Q99MS8 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Tpgs1Q99MS8 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Tpgs1Q99MS8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Tpgs1Q99MS8 Gm24543-201ENSMUST00000103867 82 ntBASIC15.06■□□□□ 0
Tpgs1Q99MS8 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Tpgs1Q99MS8 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.06■□□□□ 0
Tpgs1Q99MS8 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms